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#TransposableElements

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Amelia Cervera 🧬<p>Harnessing eukaryotic retroelement proteins for transgene insertion into human safe-harbor loci.<br><a href="https://genomic.social/tags/GenomeEditing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>GenomeEditing</span></a> <a href="https://genomic.social/tags/GeneTherapy" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>GeneTherapy</span></a> <a href="https://genomic.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a><br><a href="https://www.nature.com/articles/s41587-024-02137-y" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">nature.com/articles/s41587-024</span><span class="invisible">-02137-y</span></a></p>
Amelia Cervera 🧬<p>Long-read detection of transposable element mobilization in the soma of hypomethylated Arabidopsis thaliana individuals.<br><a href="https://genomic.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://genomic.social/tags/SomaticTransposition" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SomaticTransposition</span></a> <a href="https://genomic.social/tags/LongReads" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>LongReads</span></a> <a href="https://genomic.social/tags/Arabidopsis" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Arabidopsis</span></a> <a href="https://genomic.social/tags/PlantScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PlantScience</span></a> <a href="https://genomic.social/tags/Preprint" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Preprint</span></a><br><a href="https://www.biorxiv.org/content/10.1101/2025.02.07.637047v1" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.02.07.637047v1</span></a></p>
Amelia Cervera 🧬<p>High short tandem repeat mutation recurrence in heat-stressed Arabidopsis thaliana lines.<br><a href="https://genomic.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://genomic.social/tags/Arabidopsis" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Arabidopsis</span></a> <a href="https://genomic.social/tags/HeatStress" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>HeatStress</span></a> <a href="https://genomic.social/tags/ShortTandemRepeats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ShortTandemRepeats</span></a> <a href="https://genomic.social/tags/Preprint" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Preprint</span></a> <br><a href="https://www.biorxiv.org/content/10.1101/2025.01.24.634728v1" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.01.24.634728v1</span></a></p>
Lukas VFN 🇪🇺<p>How tiny algae shaped the <a href="https://scholar.social/tags/evolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>evolution</span></a> of giant clams <a href="https://phys.org/news/2025-01-tiny-algae-evolution-giant-clams.html" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">phys.org/news/2025-01-tiny-alg</span><span class="invisible">ae-evolution-giant-clams.html</span></a> <a href="https://www.nature.com/articles/s42003-024-07423-8" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">nature.com/articles/s42003-024</span><span class="invisible">-07423-8</span></a></p><p>"T. maxima have evolved more genes for sensors to distinguish friendly <a href="https://scholar.social/tags/algae" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>algae</span></a> from harmful <a href="https://scholar.social/tags/bacteria" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>bacteria</span></a>, <a href="https://scholar.social/tags/viruses" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>viruses</span></a>... it has tuned down some of its immune genes in a way that likely helps the <a href="https://scholar.social/tags/animals" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>animals</span></a> tolerate <a href="https://scholar.social/tags/microbes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>microbes</span></a>... As a result of the weakened <a href="https://scholar.social/tags/ImmuneSystem" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ImmuneSystem</span></a>, its genome contains a large number of <a href="https://scholar.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> left behind by viruses. These aspects highlight the tradeoffs of <a href="https://scholar.social/tags/symbiosis" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>symbiosis</span></a>"</p>
Amelia Cervera 🧬<p>LINE-1 retrotransposons regulate the exit of human pluripotency and early brain development.<br><a href="https://genomic.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://genomic.social/tags/Retrotransposons" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Retrotransposons</span></a> <a href="https://genomic.social/tags/LINE" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>LINE</span></a>-1 <a href="https://genomic.social/tags/InducedPluripotentStemCells" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>InducedPluripotentStemCells</span></a> <a href="https://genomic.social/tags/BrainOrganoids" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>BrainOrganoids</span></a> <a href="https://genomic.social/tags/Preprint" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Preprint</span></a> <br><a href="https://www.biorxiv.org/content/10.1101/2025.01.17.633315v1" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.01.17.633315v1</span></a></p>
Amelia Cervera 🧬<p>Interplay between Two Paralogous Human Silencing Hub (HuSH) Complexes in Regulating LINE-1 Element Silencing</p><p><a href="https://genomic.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://genomic.social/tags/Retrotransposons" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Retrotransposons</span></a> <a href="https://genomic.social/tags/Silencing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Silencing</span></a> <a href="https://genomic.social/tags/HuSH" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>HuSH</span></a> <a href="https://genomic.social/tags/LINE" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>LINE</span></a>-1</p><p><a href="https://www.nature.com/articles/s41467-024-53761-w" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">nature.com/articles/s41467-024</span><span class="invisible">-53761-w</span></a></p>
Amelia Cervera 🧬<p>Transposable elements are prevalent vectors of transgenerational epigenetic inheritance in nature.<br><a href="https://genomic.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://genomic.social/tags/TEs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TEs</span></a> <a href="https://genomic.social/tags/Arabidopsis" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Arabidopsis</span></a> <a href="https://genomic.social/tags/Epigenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Epigenetics</span></a> <a href="https://genomic.social/tags/Preprint" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Preprint</span></a> <br><a href="https://www.biorxiv.org/content/10.1101/2024.09.20.614076v1.full.pdf" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">24.09.20.614076v1.full.pdf</span></a></p>
PLOS Biology<p>Where do new genes come from? @HassanZaman91 @barricklab &amp;co show that within the timescale of the <a href="https://fediscience.org/tags/LTEE" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>LTEE</span></a> experiment, the co-option of <a href="https://fediscience.org/tags/promoters" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>promoters</span></a>, mainly from <a href="https://fediscience.org/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a>, serves as the major source of raw material for <a href="https://fediscience.org/tags/DeNovoGenes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>DeNovoGenes</span></a> <a href="https://fediscience.org/tags/PLOSBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PLOSBiology</span></a> <a href="https://plos.io/4a8p6DT" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="">plos.io/4a8p6DT</span><span class="invisible"></span></a></p>
Isabelle Stévant<p>My paper just got accepted just before the end-of-the-year celebrations 🥳 Although modest, the story remains cool and promising for future investigations in the coming years!<br>I focused on how transposable elements behave while mouse fetal gonads differentiate as testes or ovaries.<br><a href="https://www.frontiersin.org/articles/10.3389/fcell.2023.1327410" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">frontiersin.org/articles/10.33</span><span class="invisible">89/fcell.2023.1327410</span></a><br><a href="https://genomic.social/tags/TEs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TEs</span></a> <a href="https://genomic.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://genomic.social/tags/developmental_biology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>developmental_biology</span></a> <a href="https://genomic.social/tags/SexDet" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SexDet</span></a> <a href="https://genomic.social/tags/biology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>biology</span></a> <a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>bioinformatics</span></a> <a href="https://genomic.social/tags/RStats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RStats</span></a></p>
Phred Benham<p>My latest preprint exploring transposable element (TE) activity in the genomes of sparrows.</p><p><a href="https://biorxiv.org/cgi/content/short/2023.10.26.564301v1" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">biorxiv.org/cgi/content/short/</span><span class="invisible">2023.10.26.564301v1</span></a></p><p>We found remarkably high levels of repeat content in the newly generated genomes of <br>Bell's, Song, and Savannah Sparrow. 31% of the Bell's sparrow genome is spanned by repetitive elements.<br>This is ~3x as much as previously reported in most songbirds.</p><p>Thanks to all my co-authors for their contributions to this project!</p><p><a href="https://ecoevo.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Genomics</span></a> <br><a href="https://ecoevo.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a><br><a href="https://ecoevo.social/tags/ornithology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ornithology</span></a> <br><a href="https://ecoevo.social/tags/sparrows" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>sparrows</span></a></p>
Isabelle Stévant<p>I can finally communicate about it! Here is my last preprint: <a href="https://www.biorxiv.org/content/10.1101/2023.10.23.563600v1" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">23.10.23.563600v1</span></a><br>It is part of a collaborative project between my official lab from Tel-Aviv and my host lab in Montpellier. <a href="https://genomic.social/tags/SexDet" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SexDet</span></a> <a href="https://genomic.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://genomic.social/tags/stem" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>stem</span></a> <a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>bioinformatics</span></a></p>
PLOS Biology<p>.@AnnaOsnato &amp;co explore a <a href="https://fediscience.org/tags/PLOSBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PLOSBiology</span></a> study which reveals a previously undefined group of cells in the early human <a href="https://fediscience.org/tags/embryo" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>embryo</span></a> that diverges from the main lineages &amp; undergoes apoptosis through the activity of young <a href="https://fediscience.org/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://plos.io/3CHIA45" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="">plos.io/3CHIA45</span><span class="invisible"></span></a></p>
Physalia-courses<p>Many thanks to our incredible instructors (<span class="h-card"><a href="https://qoto.org/@clementgoubert" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>clementgoubert</span></a></span> and Valentina Peona) and this engaged group of attendees who made the Bioinformatic analysis of Transposable Elements course an absolute blast! 🌟👏 <br><a href="https://mas.to/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bioinformatics</span></a> <a href="https://mas.to/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://mas.to/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Genomics</span></a></p>
Physalia-courses<p>🎉We're thrilled to be underway with our "Bioinformatic Analysis of Transposable Elements" course with two 💫exceptional and emerging talents <span class="h-card"><a href="https://qoto.org/@clementgoubert" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>clementgoubert</span></a></span> and @valepeona in the field of Transposable Elements science.</p><p><a href="https://mas.to/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Genomics</span></a> <a href="https://mas.to/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bioinformatics</span></a> <a href="https://mas.to/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a></p>
Phys.org<p>Referenced link: <a href="https://phys.org/news/2023-05-prevalence-transposable-elements-clues-worldwide.html" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="ellipsis">phys.org/news/2023-05-prevalen</span><span class="invisible">ce-transposable-elements-clues-worldwide.html</span></a><br>Discuss on <a href="https://discu.eu/q/https://phys.org/news/2023-05-prevalence-transposable-elements-clues-worldwide.html" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="ellipsis">discu.eu/q/https://phys.org/ne</span><span class="invisible">ws/2023-05-prevalence-transposable-elements-clues-worldwide.html</span></a></p><p>Originally posted by Phys.org / @physorg_com: <a href="http://nitter.platypush.tech/physorg_com/status/1653078311235469321#m" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">http://</span><span class="ellipsis">nitter.platypush.tech/physorg_</span><span class="invisible">com/status/1653078311235469321#m</span></a></p><p>Prevalence of <a href="https://social.platypush.tech/tags/transposableelements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>transposableelements</span></a> may provide clues to worldwide <a href="https://social.platypush.tech/tags/mammal" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>mammal</span></a> biodiversity @stonybrooku @sciencemagazine <a href="https://www.science.org/doi/10.1126/science.abn1430" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">science.org/doi/10.1126/scienc</span><span class="invisible">e.abn1430</span></a> <a href="https://phys.org/news/2023-05-prevalence-transposable-elements-clues-worldwide.html" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="ellipsis">phys.org/news/2023-05-prevalen</span><span class="invisible">ce-transposable-elements-clues-worldwide.html</span></a></p>
Physalia-courses<p>🥁There are still a few seats available for some of our courses in May and June!<br><a href="https://mas.to/tags/Python" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Python</span></a> <a href="https://mas.to/tags/Rstats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Rstats</span></a> <a href="https://mas.to/tags/singlecell" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>singlecell</span></a> <a href="https://mas.to/tags/RNAseq" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RNAseq</span></a> <a href="https://mas.to/tags/transposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>transposableElements</span></a> <a href="https://mas.to/tags/Metagenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Metagenomics</span></a> <a href="https://mas.to/tags/GLMs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>GLMs</span></a> <a href="https://mas.to/tags/rspatial" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>rspatial</span></a> <a href="https://mas.to/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Genomics</span></a> <a href="https://mas.to/tags/DataScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>DataScience</span></a></p>
Arnaud Le Rouzic<p>Hi the fediverse! </p><p>Our lastest paper on the theoretical dynamics of transposable elements is out (in Theor Pop Biol: <a href="https://www.sciencedirect.com/science/article/pii/S0040580923000096" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">sciencedirect.com/science/arti</span><span class="invisible">cle/pii/S0040580923000096</span></a> , in <span class="h-card"><a href="https://ecoevo.social/@biorxiv_evobio" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>biorxiv_evobio</span></a></span> : <a href="https://www.biorxiv.org/content/10.1101/2022.07.05.498868v2" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">22.07.05.498868v2</span></a>). We derived population genetics models of TE amplification when regulated by piRNAs, accoding to the "trap model". -&gt; Thread</p><p><a href="https://fediscience.org/tags/PopulationGenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PopulationGenetics</span></a> <a href="https://fediscience.org/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://fediscience.org/tags/TheorPopBiol" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TheorPopBiol</span></a> <a href="https://fediscience.org/tags/piRNA" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>piRNA</span></a> <a href="https://fediscience.org/tags/EvolutionaryBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>EvolutionaryBiology</span></a> <a href="https://fediscience.org/tags/EvoBio" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>EvoBio</span></a> <a href="https://fediscience.org/tags/Publication" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Publication</span></a> <a href="https://fediscience.org/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Genomics</span></a></p>
Physalia-courses<p>🥁Registration is now open for the course "Bioinformatic analysis of Transposable Elements" with Valentina Peona &amp; <span class="h-card"><a href="https://qoto.org/@clementgoubert" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>clementgoubert</span></a></span> in June</p><p>🗓️ (online) June, 12-15</p><p>🔗<a href="https://physalia-courses.org/courses-workshops/course24/" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://</span><span class="ellipsis">physalia-courses.org/courses-w</span><span class="invisible">orkshops/course24/</span></a></p><p>💡 Attendees will learn how to conduct computational analyses of TEs, interpret the results in the light of TE biology, and improve TE annotations through manual curation</p><p><a href="https://mas.to/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://mas.to/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Genomics</span></a> <a href="https://mas.to/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bioinformatics</span></a></p>
Francois Sabot<p>And here is the new version of the manuscript !<br>Have fun reading it <a href="https://genomic.social/tags/nanopore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>nanopore</span></a> <a href="https://genomic.social/tags/TransposableElements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TransposableElements</span></a> <a href="https://genomic.social/tags/snakemake" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>snakemake</span></a> <a href="https://genomic.social/tags/drosophila" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>drosophila</span></a> </p><p><a href="https://www.biorxiv.org/content/10.1101/2022.07.21.500944v2" rel="nofollow noopener noreferrer" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">22.07.21.500944v2</span></a></p>
PopgenTUM<p>A <a href="https://ecoevo.social/tags/Postdoc" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Postdoc</span></a> position is available in our lab at <span class="h-card"><a href="https://wisskomm.social/@tu_muenchen" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>tu_muenchen</span></a></span> on fungal <a href="https://ecoevo.social/tags/popgen" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>popgen</span></a> in Blumeria species and <a href="https://ecoevo.social/tags/transposableelements" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>transposableelements</span></a>. Knowledge and practical experience in bioinformatics and population genetics analysis of full genome data is desired. The salary is according to German/Bavarian income level TV-L E13 (100%). Informal inquiries can be addressed to me via email (aurelien.tellier@tum.de). Please RT. <a href="https://ecoevo.social/tags/EvolutionaryBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>EvolutionaryBiology</span></a> <a href="https://ecoevo.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Genomics</span></a> <a href="https://ecoevo.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bioinformatics</span></a> <a href="https://ecoevo.social/tags/Proteomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Proteomics</span></a> <span class="h-card"><a href="https://a.gup.pe/u/jobsecoevo" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>jobsecoevo</span></a></span></p>
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